Insertion junction: CLIP2.071780_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071780
Chromosome:plastome
Location:90882
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802301 ycf3,ChreCp037,2717008,pafI (1 of 1) PTHR26312:SF81 - PHOTOSYSTEM I ASSEMBLY PROTEIN YCF3; photosystem I assembly factor I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGCTATGCGGTTAGAAGTGGATGCTTACGATCGCAGTTATATTCTTT
Internal bar code:GTTACTGATCTAGCCTCAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:71
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGAGGGGCTGCAATTTGT
Suggested primer 2:ACAAGGTCTTGATGCACAACG