Insertion junction: CLIP2.071781_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071781
Chromosome:chromosome 8
Location:3656895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379950 PFH17,P4H17,PHX12 Prolyl 4-hydroxylase 17; (1 of 2) PTHR10869//PTHR10869:SF79 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // SUBFAMILY NOT NAMED 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCCTAGCGGCGCACGCCAGCCGGCTGACGAATTGCGTTCTGGTCCGA
Internal bar code:CTCTTGGTTATGCGTATTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2227
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGCAAGCTGTCGTTACA
Suggested primer 2:CCTGAAACCCTAGCCCACAG