Insertion junction: CLIP2.071785_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071785
Chromosome:chromosome 11
Location:3708758
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478850 (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAAAGCGCGTGTCCCATCTACTACCACTACACTTCAAGGTTTGGCAC
Internal bar code:TACCATGCTATTTTGTCAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:802
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCTTCATCACATGTCAG
Suggested primer 2:GAACCTAATTGCTGCGAGCG