Insertion junction: CLIP2.071787_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071787
Chromosome:chromosome 12
Location:8701946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g547700 TTL14 (1 of 14) PF03133 - Tubulin-tyrosine ligase family (TTL); Putative tubulin tyrosine ligase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTCTTTGTAATATCGCAACCATAGCGGTTCTGGACTTTCCACTTACG
Internal bar code:AGACAAACAGGGACTGTTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1541
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTTTGGTGTGCGCAATC
Suggested primer 2:GCGTATTCCCAGTCCCCAAA