Insertion junction: CLIP2.071794_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071794
Chromosome:chromosome 1
Location:2929953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800059 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGCTCACTGCCGGTATTGCTGTGTGCTATCTTGCGCAGCGACCGCTT
Internal bar code:GCAATCATAAGTTGGATTCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1912
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGTGAGTTGTTTGCATG
Suggested primer 2:GAACCTAATTGCTGCGAGCG