Insertion junction: CLIP2.071800_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071800
Chromosome:chromosome 17
Location:4635878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732500 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGGAACCTTGCTGCGTGCTTGAGTCTCTGCAGTTGACCTGATATAAA
Internal bar code:TGGGACGTGTAGCGCTAGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2088
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCATCTCGGCTCTCGAC
Suggested primer 2:AGACGCAGCTGAGTAGGGTA