Insertion junction: CLIP2.071801_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071801
Chromosome:chromosome 16
Location:6072788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677700 NUP62 Nucleoporin 62; (1 of 1) K14306 - nuclear pore complex protein Nup62 (NUP62, NSP1) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCACCTGCGCTGTGTGTGTGTGTGTGGGGGGGGGGGGCGGGAGGGA
Internal bar code:TATAGGATTATCCCCTGTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2259
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCACATGCGCTTTGACAC
Suggested primer 2:TTCAAATGCGGGCTGGTTTG