Insertion junction: CLIP2.071801_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071801
Chromosome:chromosome 16
Location:6072795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677700 NUP62 Nucleoporin 62; (1 of 1) K14306 - nuclear pore complex protein Nup62 (NUP62, NSP1) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCGGCTGCCTCACGGGAAGGCCTCTCCTACGAACCGAGGTCGAGGGTT
Internal bar code:TTGGTGCTTGTAGTATCAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1016
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAAATGCGGGCTGGTTTG
Suggested primer 2:CCTCACATGCGCTTTGACAC