Insertion junction: CLIP2.071802_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071802
Chromosome:chromosome 10
Location:5000830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454400 (1 of 1) K10632 - BRCA1-associated protein (BRAP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAATCTGGACCGCTGAGCCCGAGCGAGGAGTGTAGCAGCGAGATCTAA
Internal bar code:AGCGATGGATGTGTATAGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2829
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAACATTCGAGCACTCCT
Suggested primer 2:CAGAAGTCGGCGATGGTCAT