Insertion junction: CLIP2.071810_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071810
Chromosome:plastome
Location:76887
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802295 ChreCp030,psbN,2717031 photosystem II protein N; (1 of 1) K02715 - PsbN protein (psbN) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCTCGACAAAATGACTTTCATAAAAATATAAAGTAGTTAGCTACTTA
Internal bar code:GGCCATAAGGGATGCGGGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:491
LEAP-Seq percent confirming:60.8696
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGCAGTCCCTTTTCCCC
Suggested primer 2:GAAGGGGAAGGACGTCAGTG