Insertion junction: CLIP2.071812_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071812
Chromosome:chromosome 16
Location:5593642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g681400 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCGCGCCAACTGCAACAAGGCAACGTTTTAGAGTTGTCCGTTGCCAG
Internal bar code:GATGCCCGGGGAGAACGGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5431
LEAP-Seq percent confirming:97.0149
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:TACAACTCCTGCACGGCAAT
Suggested primer 2:AGTTTGGGCTTACGGAGTGG