Insertion junction: CLIP2.071828_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071828
Chromosome:chromosome 7
Location:176848
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g313302 (1 of 1) K03027 - DNA-directed RNA polymerases I and III subunit RPAC1 (RPC40, POLR1C) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGTTGTTGCCCTGAGCTGCGCCTCAGCGCCTGCCTGCCTCTGCCTGT
Internal bar code:GAGGTCTCGGGGTCCATTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCATTCTGTGAGCGAGC
Suggested primer 2:TGTTTTGTGCGTCGCGAATT