Insertion junction: CLIP2.071829_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071829
Chromosome:chromosome 2
Location:5296681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112900 TPT6,TPT5 (1 of 3) K15356 - GDP-mannose transporter (VRG4, GONST1); Putative GDP-mannose transporter 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGTATGCAGTTTCGCGGCTCACAGGAATGCCAGGGCGACACCAATGCG
Internal bar code:ACTCTTGCTCCTTGATAAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1373
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGCGAGCCCATTAACTT
Suggested primer 2:CCTTCCCTTCTGTCCACACC