Insertion junction: CLIP2.071830_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071830
Chromosome:chromosome 1
Location:5663005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040500 (1 of 1) K10643 - CCR4-NOT transcription complex subunit 4 (CNOT4, NOT4, MOT2) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGTAGGCGCTGAGAGGACAGACTGAGTGCCCGGTCTCCAGGGATGGGG
Internal bar code:CCAACTGCCAGGCTCGTAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2525
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACATCTAGAAGCGCGCC
Suggested primer 2:AGAACAAGAGCCAGAGTCGC