Insertion junction: CLIP2.071831_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071831
Chromosome:chromosome 9
Location:6177590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g413150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCTCTTCAGCCCCAATGGCACTACGCGACCGGGTCTCCCTGCCTAAAC
Internal bar code:AACTCTACTCGCATTCTCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4245
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAGGATCTTATGCGCCT
Suggested primer 2:TCGGAGCTCGATTTCGTAGC