Insertion junction: CLIP2.071848_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071848
Chromosome:chromosome 7
Location:4684243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g345000 5'UTR
Cre07.g345001 (1 of 3) PF01936 - NYN domain (NYN) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTTGGGCTTGGCGCAATTGCATTTGCCTCATTCACGCCGGCTGCCCCG
Internal bar code:GTCCGGGGCGGAGAGCGCGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3340
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATGACGAGCATGATGGG
Suggested primer 2:GACCACAGTGACGTTGTTGC