Insertion junction: CLIP2.071849_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071849
Chromosome:chromosome 3
Location:4587037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176500 5'UTR
Cre03.g176550 PRMT5,PRM5 (1 of 1) K02516 - protein arginine N-methyltransferase 5 (PRMT5, HSL7); Protein-/Histone-arginine N-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTGCTAGAGTGCTGCCCAGGGCACTAGTGCTGCATGGAGTGCACGC
Internal bar code:GGAGGAGCAGTGACCAGAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:710
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCACAAAGTCAAAGCCG
Suggested primer 2:CCTCCTTGGCGTACTCGATC