Insertion junction: CLIP2.071851_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071851
Chromosome:chromosome 1
Location:5489765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038850 (1 of 1) PTHR24012//PTHR24012:SF308 - FAMILY NOT NAMED // PROTEIN Y55F3AM.3, ISOFORM A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGTACAACCAGTGGGTAACCCGACTTAGCCCGCTCACGTGGATGGCA
Internal bar code:TCCTCGGATATCGACACATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:292
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGGTCATGTGGGTCAAG
Suggested primer 2:CTGGAGATCTGCTACTGCGG