Insertion junction: CLIP2.071851_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071851
Chromosome:chromosome 1
Location:5489788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038850 (1 of 1) PTHR24012//PTHR24012:SF308 - FAMILY NOT NAMED // PROTEIN Y55F3AM.3, ISOFORM A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACATGGGGATTCAGGACAAGCTGCAATGGGGTGATTTGGGGATGAGGAA
Internal bar code:TCCTCGGATATCGACACATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2345
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGATCTGCTACTGCGG
Suggested primer 2:TGACGGTCATGTGGGTCAAG