Insertion junction: CLIP2.071863_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071863
Chromosome:chromosome 11
Location:257989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467559 (1 of 1) IPR003590//IPR006553 - Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGGTGTTGGGACTGAGCCCCCAGAACGAAACGTTCAGGGGGCTGAAG
Internal bar code:CCAGGGGAGCTACGCAGATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:503
LEAP-Seq percent confirming:7.40741
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAGGTGGTGAGCACGAC
Suggested primer 2:GTAATGGAGCGTAGGGTGGG