Insertion junction: CLIP2.071864_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071864
Chromosome:chromosome 8
Location:1413872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364400 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAATTACTGCCGCGGATTAGATGACACCGGTTGCTGTCGACCCCAGC
Internal bar code:GTTCAAGTATTTCATCGTAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3170
LEAP-Seq percent confirming:98.5075
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGGTAATTGTTGCCGCG
Suggested primer 2:GCATAAATGGAGCAGTGCGG