Insertion junction: CLIP2.071868_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071868
Chromosome:chromosome 10
Location:1471690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428433 FDG2 Formamidopyrimidine-DNA glycosylase; (1 of 1) 3.2.2.23 - DNA-formamidopyrimidine glycosylase / Formamidopyrimidine-DNA glycosylase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGCGGAGCCGGTCACGTCACTGTCTCACTGTCGCTGTTGTGATAAGC
Internal bar code:AGAATCTGATGTTTGGACGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1532
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGATTGTAGGTGTCGCCC
Suggested primer 2:AACGTGTGTTGCGTGTCATG