Insertion junction: CLIP2.071876_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071876
Chromosome:chromosome 8
Location:4223295
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTGGGACCCCCAGACCGACCGACCGACCGGCCACTTTGAGGGGTCAT
Internal bar code:GCCGAGAGGTGATATACGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1185
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCAGCGGGAGAGATAAT
Suggested primer 2:CGCCTTGGGAACACACTTTG