Insertion junction: CLIP2.071880_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071880
Chromosome:chromosome 11
Location:495163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467593 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGACTCTAATGTCCCATGTGCTCTGAGCCGGGACGCCCTTTAGGAGCG
Internal bar code:TATAGATGGCGTAGGTATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2281
LEAP-Seq percent confirming:61.7647
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CATACCCGGTTGTCCCACAA
Suggested primer 2:GCAAACGGCGTTGTTGTAGT