Insertion junction: CLIP2.071880_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071880
Chromosome:chromosome 11
Location:1941236
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g467780 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGGGCTGGGATCAACGTATTGATCAGACTTTGCGTCTTTGCTTAGGA
Internal bar code:AGCAGGCCATGGCAGTAGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:978
LEAP-Seq percent confirming:31.8182
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGGAGACCGCTGTGATC
Suggested primer 2:GTGTGTGTGTGTGCGACATC