Insertion junction: CLIP2.071885_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071885
Chromosome:chromosome 11
Location:1812794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467600 (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCTGCACGTCCCGTGGGTGCCCTCAGTGTGCGGCACCCGTACATGTT
Internal bar code:ACCCGCTGCTTTTTATGGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1392
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGTCAGTTTGGCACGCA
Suggested primer 2:GTGAGCAAAGGTCCGTGAGA