Insertion junction: CLIP2.071890_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071890
Chromosome:chromosome 5
Location:2492463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239100 FPG2 (1 of 1) 6.3.2.17 - Tetrahydrofolate synthase / Tetrahydrofolylpolyglutamate synthase; Putative folylpolyglutamate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACACACCTTGCTGCCCCAGCCTGCGCAACAGTGCGGACGCCATCAG
Internal bar code:TTCACAGACGAACTATAAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:973
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGGAGCCAGGAGTTAG
Suggested primer 2:AACATCGGTGCTAACTGGGG