Insertion junction: CLIP2.071896_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071896
Chromosome:chromosome 16
Location:3601583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671685 (1 of 5) 2.3.1.24 - Sphingosine N-acyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTAATCGCTGCATCCCCACTTCAGCAGATGCTGAGACAGGCTGAGAC
Internal bar code:AATTATTTTTCTTCAGAGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:354
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGGCCCCTATTCTGTAA
Suggested primer 2:TATGGGGGAGGTGCCATACA