Insertion junction: CLIP2.071898_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071898
Chromosome:chromosome 17
Location:5524414
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g739450 DRT1 DR1-like protein; (1 of 1) PTHR11064//PTHR11064:SF8 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // PROTEIN DR1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTTCCCCTCTGCCGCTCGCCCGCCCATCCCTGCTCCCCTCCCTCCCT
Internal bar code:TGAGGCCGGGTTGATGTGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGCCTTTGTAAACACG
Suggested primer 2:CAGACCTGGACAGTGGACAC