Insertion junction: CLIP2.071902_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071902
Chromosome:chromosome 10
Location:876325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423700 (1 of 1) PF07985 - SRR1 (SRR1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGATGCCGGTGAAAGGCGATGTGCTAGCGTGGTGGTCAGAGCGTAGGT
Internal bar code:ACTTCTGCAGGGCGTCACTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1436
LEAP-Seq percent confirming:68.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCAACTGAGCTTGGGGTG
Suggested primer 2:TAACAGAGGGAGGGACGGAG