Insertion junction: CLIP2.071902_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071902
Chromosome:chromosome 10
Location:876325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423700 (1 of 1) PF07985 - SRR1 (SRR1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACAGCTGTGGCTTTACATCCTACCTCCTAAATCCGCACAATATCAGT
Internal bar code:CCTCATTACCTGCAAAGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2296
LEAP-Seq percent confirming:80.6818
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:TAACAGAGGGAGGGACGGAG
Suggested primer 2:TAGCAACTGAGCTTGGGGTG