Insertion junction: CLIP2.071909_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071909
Chromosome:chromosome 12
Location:2183302
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509250 EYE2 Eyespot assembly protein 2; (1 of 1) PTHR18929//PTHR18929:SF99 - PROTEIN DISULFIDE ISOMERASE // SUBFAMILY NOT NAMED 5'UTR
Cre12.g509300 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTCGGGTTTTGTCAAACGCCAAAAGCTGCACTATAGTCACGTGTACG
Internal bar code:CCGCTGAAATGTGATATTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1456
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCACACTGTTTTCGTGCC
Suggested primer 2:GATGCCAGAAACTCACCCCA