Insertion junction: CLIP2.071911_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071911
Chromosome:chromosome 1
Location:2967767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018650 (1 of 1) PF01342//PF13771 - SAND domain (SAND) // PHD-like zinc-binding domain (zf-HC5HC2H) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAAGTATCCTGGGTGCCAGCTCCCCGCCGGCGGGGCAGCGCTGCTGCG
Internal bar code:GTTGAGGTGCTTCTAAGGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:790
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGCAGTGAACCGTTTGC
Suggested primer 2:TGTGTGTCACGCTACGACAA