Insertion junction: CLIP2.071912_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071912
Chromosome:chromosome 2
Location:4657568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g107650 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCCCCCCTCACGAGGTGCGTGAGGATGCTTGGGCTTCCAACAAGCCT
Internal bar code:TGGTTTACTTTTGGTGGGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5295
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGCAACGCTGAAGAAA
Suggested primer 2:CAGTTCAGTCGGACACGTCA