Insertion junction: CLIP2.071915_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071915
Chromosome:chromosome 6
Location:5340444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284950 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTAGCCGCCCGAGGCTGAAAAGGAACTGCCCACTTCGTGCAGCGGAC
Internal bar code:GATCGAAAAATGTGTTCGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2949
LEAP-Seq percent confirming:23.8806
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCAAAGAATCCTCCATG
Suggested primer 2:AGGCGCTCAAGATCATCGAG