Insertion junction: CLIP2.071923_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071923
Chromosome:chromosome 1
Location:7897227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g055453 ALS2,ALSS1 Acetolactate synthase, small subunit; (1 of 1) K01653 - acetolactate synthase I/III small subunit (E2.2.1.6S, ilvH, ilvN) 3'UTR
Cre01.g055457 (1 of 15) PTHR12291//PTHR12291:SF23 - FAMILY NOT NAMED // PROTEIN MEC-15 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTAAGCTCACACAGGAGTATCTGTGCCGCCTGAAGGCTGCTGTAAACA
Internal bar code:GTGAGCGCATTGTCAGTTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:865
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGACACGGCTTCAGGAG
Suggested primer 2:CAGCCTACCTGCGTATGGAG