Insertion junction: CLIP2.071925_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071925
Chromosome:plastome
Location:98370
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802306 2716993,ChreCp042,rpoB1 (1 of 2) K03043 - DNA-directed RNA polymerase subunit beta (rpoB); RNA polymerase beta subunit I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGATTCAGCCACGTTAGCCATTCGAGGTATTCATCCTTCACACTATGG
Internal bar code:TTTATGGCTGCTTGAAACTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:168
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTCGGGCAAGTAAACT
Suggested primer 2:AGCTGCTTGGTCGGCTATTT