Insertion junction: CLIP2.071927_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071927
Chromosome:chromosome 7
Location:1398800
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323000 DP1,TDP1 Transcription factor, E2F/dimerisation partner; (1 of 2) PTHR12548:SF9 - TRANSCRIPTION FACTOR DP 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGAGCGACTCAGCCTGGGCCCGCTACGCGTCCCTATACGCGTCCCTAT
Internal bar code:GGCGGATGAATTAGGCCTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2939
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGGAGTCTCTTGTGTGT
Suggested primer 2:CCCCTCCCCCAAACACATAC