Insertion junction: CLIP2.071931_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071931
Chromosome:chromosome 10
Location:1625296
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g429300 (1 of 2) IPR001680//IPR001810//IPR017986 - WD40 repeat // F-box domain // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGACCCGGACACTCGGAGCTCACATGGCCCGTCAACCGATATTCTCTG
Internal bar code:ATGCAACGAGCATTCGTACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1930
LEAP-Seq percent confirming:42.3077
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATGGCTCCCCACTACGA
Suggested primer 2:TACTGCCTTACACACGCCTG