Insertion junction: CLIP2.071934_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071934
Chromosome:chromosome 10
Location:4911298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453766 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCGATGGTTGCAGACAACCCCCCTCCCCCACATACCTAACCAAACCG
Internal bar code:TTCCACTGAATGTACCCAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:6864
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGAGTGCTGGTTCAAGGG
Suggested primer 2:GGAGTCACATCAAGGTCGCA