Insertion junction: CLIP2.071937_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071937
Chromosome:chromosome 3
Location:6397109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192750 (1 of 4) 2.7.11.13 - Protein kinase C / PKC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGCAATGGGCAGAGTGTGATTGCTTGTTGTGGTAGACAACAGAAGC
Internal bar code:TGGTTCACGGGTAGCGATTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1320
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GAATCAGCGCCGGAGATGTA
Suggested primer 2:ATGCATGCCGAGTACTGACC