Insertion junction: CLIP2.071938_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071938
Chromosome:chromosome 9
Location:5570713
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g409550 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCATCTCCTGAATACCTACCCGCAGGCAGCCCCGGAACGGCCCCCTCA
Internal bar code:TGAGCACCGAGGGTCATTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:121
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTTAGTTTGGGCTGGTA
Suggested primer 2:GGCTGGTCAATGTCAGGTCA