Insertion junction: CLIP2.071943_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071943
Chromosome:chromosome 9
Location:4390872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400330 ALK6 Aurora-like kinase; (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCTCTGTCAAGGTCTAGCCTTTATCATGGTTCAGACATAAGCAACATG
Internal bar code:ATTGCAAAACCGGGCTATCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1767
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCACTATCGTTTCGCGC
Suggested primer 2:CTCAAACTGCTCAACGTGCC