Insertion junction: CLIP2.071950_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071950
Chromosome:chromosome 2
Location:8282660
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g143350 PDE6 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACAGCGGTCCGTTGGAGGGCAAGGCCTCTGCTGTTGCCTTGCACTGA
Internal bar code:CATTTTGAGACCGCTAGTCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1871
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTGCTGCATTCATACGC
Suggested primer 2:GTCAAGGGTGAGTGTCTGGG