Insertion junction: CLIP2.071953_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071953
Chromosome:chromosome 9
Location:1210094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400900 (1 of 4) IPR012337//IPR025398 - Ribonuclease H-like domain // Domain of unknown function DUF4371 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGCGGTTAGGCCGCGATGGCGCTCTGCCTGTGTGTATGTGCGGTAGA
Internal bar code:AGGGCCATCACTTCAGAGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3702
LEAP-Seq percent confirming:71.0843
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGAATGTCTTGACCCAG
Suggested primer 2:GGCCGTTCTATGAGAGGCTC