Insertion junction: CLIP2.071959_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071959
Chromosome:chromosome 4
Location:1210020
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g215350 (1 of 1) K14552 - NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) (NAN1, UTP17, WDR75) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAATGTGAGGAAGGCGTGTGCCAGCGCCGTGGGCGGCGGCAGCACGTG
Internal bar code:TGTGTGGCCGGGCGGTGACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1501
LEAP-Seq percent confirming:0.862069
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:115
LEAP-Seq n unique pos:116

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGGATGTGGAGAGCAAC
Suggested primer 2:GTTGGTGTTGCAACCCGTAC