Insertion junction: CLIP2.071960_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071960
Chromosome:chromosome 2
Location:1805935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086887 NUP98-96,NUP189 Nucleoporin 98-96; (1 of 1) K14297 - nuclear pore complex protein Nup98-Nup96 (NUP98, ADAR2, NUP116) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAATAACTCAGCGATATATCGCACCTACAAGTACGCATTCGCCAACAA
Internal bar code:GCGGTGGCAATGCGGATTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1255
LEAP-Seq percent confirming:95.7447
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GAGACAACCTGCGTCCAGAA
Suggested primer 2:GCCGTGATTCACTGGAGTCA