Insertion junction: CLIP2.071967_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071967
Chromosome:chromosome 3
Location:2421857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158700 (1 of 1) PTHR10157:SF23 - DBH-LIKE MONOOXYGENASE PROTEIN 2-RELATED 3'UTR
Cre03.g158750 HEL14 (1 of 1) PTHR24031:SF306 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 11; DEAD/DEAH box helicase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGAATGTACAACAGCTGCAGCAACAACACACCGTGGATGTGGCCGGG
Internal bar code:CAGCACGGCGATACAGTCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5194
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGCCGTCATTCTCACA
Suggested primer 2:TGCCATTGTCGTCGGTTGTA