Insertion junction: CLIP2.071970_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071970
Chromosome:chromosome 6
Location:1361928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259401 SMM16 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 2) PTHR10108//PTHR10108:SF813 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTGTCGAGCAGTGAAGATAGCAACGAGAGCAGAGAAAGGTAGGGCAG
Internal bar code:ATAGCATGCTTTAGGGAAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1159
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGCGAAGAAGAGTGAGT
Suggested primer 2:CGCCATGCTTAGACTCCGAT