Insertion junction: CLIP2.071978_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071978
Chromosome:chromosome 12
Location:691987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g492950 NSG5,DIV15,RIR1 (1 of 1) K10807 - ribonucleoside-diphosphate reductase subunit M1 (RRM1); Ribonucleoside-diphosphate reductase R1 subunit 5'UTR
Cre12.g493000 (1 of 1) IPR006153//IPR020846 - Cation/H+ exchanger // Major facilitator superfamily domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATCAAGCACAGGTTTCTTGGTTTTCATGTCAGAATTTTGAGCCCCAT
Internal bar code:TCCCTGGGGTTATCCAGTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4112
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGTTCTTGTGCAGGTTG
Suggested primer 2:TCCCCTCTGCACTAGGACTC